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Biotechnology Information ncbi geo scrna seq database
Ncbi Geo Scrna Seq Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/scrna-seq+database/data+rna+seq+%E2%80%A2/pm41260570-334-10-8
Average 86 stars, based on 1 article reviews
ncbi geo scrna seq database - by Bioz Stars, 2026-09
86/100 stars

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Related Articles

Expressing:

Article Title: Chemokine Ligands and Receptors Regulate Macrophage Polarization in Atherosclerosis: A Comprehensive Database Mining Study
Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

Article Title: Localization of brain neuronal IL-1R1 reveals specific neural circuitries responsive to immune signaling
Article Snippet: The bioinformatics analysis was performed using the publicly available scRNA-seq database generated from different mouse and human brain regions in three previous studies [ , , ], using counting matrix and cell clustering information provided by the authors deposited at the National Center for Biotechnology Information Gene Expression Omnibus under accession number GSE71585, GSE134163 and GSE116470.

Article Title: Neuronal interleukin-1 receptors mediate pain in chronic inflammatory diseases
Article Snippet: The bioinformatic analysis was performed using the publicly available scRNA-seq database generated from adult mouse DRG neurons , using raw sequence data deposited at the National Center for Biotechnology Information Sequence Read Archive under accession no. SRX3809270.

RNA Sequencing:

Article Title: Chemokine Ligands and Receptors Regulate Macrophage Polarization in Atherosclerosis: A Comprehensive Database Mining Study
Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

Article Title: Localization of brain neuronal IL-1R1 reveals specific neural circuitries responsive to immune signaling
Article Snippet: The bioinformatics analysis was performed using the publicly available scRNA-seq database generated from different mouse and human brain regions in three previous studies [ , , ], using counting matrix and cell clustering information provided by the authors deposited at the National Center for Biotechnology Information Gene Expression Omnibus under accession number GSE71585, GSE134163 and GSE116470.

Article Title: Neuronal interleukin-1 receptors mediate pain in chronic inflammatory diseases
Article Snippet: The bioinformatic analysis was performed using the publicly available scRNA-seq database generated from adult mouse DRG neurons , using raw sequence data deposited at the National Center for Biotechnology Information Sequence Read Archive under accession no. SRX3809270.

High Throughput Screening Assay:

Article Title: Chemokine Ligands and Receptors Regulate Macrophage Polarization in Atherosclerosis: A Comprehensive Database Mining Study
Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

Article Title: Localization of brain neuronal IL-1R1 reveals specific neural circuitries responsive to immune signaling
Article Snippet: The bioinformatics analysis was performed using the publicly available scRNA-seq database generated from different mouse and human brain regions in three previous studies [ , , ], using counting matrix and cell clustering information provided by the authors deposited at the National Center for Biotechnology Information Gene Expression Omnibus under accession number GSE71585, GSE134163 and GSE116470.

Article Title: Neuronal interleukin-1 receptors mediate pain in chronic inflammatory diseases
Article Snippet: The bioinformatic analysis was performed using the publicly available scRNA-seq database generated from adult mouse DRG neurons , using raw sequence data deposited at the National Center for Biotechnology Information Sequence Read Archive under accession no. SRX3809270.

Functional Assay:

Article Title: Chemokine Ligands and Receptors Regulate Macrophage Polarization in Atherosclerosis: A Comprehensive Database Mining Study
Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

Article Title: Localization of brain neuronal IL-1R1 reveals specific neural circuitries responsive to immune signaling
Article Snippet: The bioinformatics analysis was performed using the publicly available scRNA-seq database generated from different mouse and human brain regions in three previous studies [ , , ], using counting matrix and cell clustering information provided by the authors deposited at the National Center for Biotechnology Information Gene Expression Omnibus under accession number GSE71585, GSE134163 and GSE116470.

Article Title: Neuronal interleukin-1 receptors mediate pain in chronic inflammatory diseases
Article Snippet: The bioinformatic analysis was performed using the publicly available scRNA-seq database generated from adult mouse DRG neurons , using raw sequence data deposited at the National Center for Biotechnology Information Sequence Read Archive under accession no. SRX3809270.

Generated:

Article Title: Chemokine Ligands and Receptors Regulate Macrophage Polarization in Atherosclerosis: A Comprehensive Database Mining Study
Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

Article Title: Localization of brain neuronal IL-1R1 reveals specific neural circuitries responsive to immune signaling
Article Snippet: The bioinformatics analysis was performed using the publicly available scRNA-seq database generated from different mouse and human brain regions in three previous studies [ , , ], using counting matrix and cell clustering information provided by the authors deposited at the National Center for Biotechnology Information Gene Expression Omnibus under accession number GSE71585, GSE134163 and GSE116470.

Article Title: Neuronal interleukin-1 receptors mediate pain in chronic inflammatory diseases
Article Snippet: The bioinformatic analysis was performed using the publicly available scRNA-seq database generated from adult mouse DRG neurons , using raw sequence data deposited at the National Center for Biotechnology Information Sequence Read Archive under accession no. SRX3809270.

Gene Expression:

Article Title: Chemokine Ligands and Receptors Regulate Macrophage Polarization in Atherosclerosis: A Comprehensive Database Mining Study
Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

Article Title: Localization of brain neuronal IL-1R1 reveals specific neural circuitries responsive to immune signaling
Article Snippet: The bioinformatics analysis was performed using the publicly available scRNA-seq database generated from different mouse and human brain regions in three previous studies [ , , ], using counting matrix and cell clustering information provided by the authors deposited at the National Center for Biotechnology Information Gene Expression Omnibus under accession number GSE71585, GSE134163 and GSE116470.

Article Title: Neuronal interleukin-1 receptors mediate pain in chronic inflammatory diseases
Article Snippet: The bioinformatic analysis was performed using the publicly available scRNA-seq database generated from adult mouse DRG neurons , using raw sequence data deposited at the National Center for Biotechnology Information Sequence Read Archive under accession no. SRX3809270.

Sequencing:

Article Title: Chemokine Ligands and Receptors Regulate Macrophage Polarization in Atherosclerosis: A Comprehensive Database Mining Study
Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

Article Title: Localization of brain neuronal IL-1R1 reveals specific neural circuitries responsive to immune signaling
Article Snippet: The bioinformatics analysis was performed using the publicly available scRNA-seq database generated from different mouse and human brain regions in three previous studies [ , , ], using counting matrix and cell clustering information provided by the authors deposited at the National Center for Biotechnology Information Gene Expression Omnibus under accession number GSE71585, GSE134163 and GSE116470.

Article Title: Neuronal interleukin-1 receptors mediate pain in chronic inflammatory diseases
Article Snippet: The bioinformatic analysis was performed using the publicly available scRNA-seq database generated from adult mouse DRG neurons , using raw sequence data deposited at the National Center for Biotechnology Information Sequence Read Archive under accession no. SRX3809270.



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Chemokines expression level in tissue-specific macrophages (log 2 TPM) <t>RNA-Seq</t> datasets were collected from ArrayXpress of European Bioinformatics Institute, which stores data from high-throughput functional genomics experiments ( https://www.ebi.ac.uk/arrayexpress ). These data include information on the expression of T-cell costimulation receptors and coinhibition receptors through experiments submitted directly to ArrayXpress (PMID: 25480296). The red colour indicated log 2 TPM > 0, green colour background indicated log 2 TPM < 0.
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Image Search Results


Chemokines expression level in tissue-specific macrophages (log 2 TPM) RNA-Seq datasets were collected from ArrayXpress of European Bioinformatics Institute, which stores data from high-throughput functional genomics experiments ( https://www.ebi.ac.uk/arrayexpress ). These data include information on the expression of T-cell costimulation receptors and coinhibition receptors through experiments submitted directly to ArrayXpress (PMID: 25480296). The red colour indicated log 2 TPM > 0, green colour background indicated log 2 TPM < 0.

Journal: CJC Open

Article Title: Chemokine Ligands and Receptors Regulate Macrophage Polarization in Atherosclerosis: A Comprehensive Database Mining Study

doi: 10.1016/j.cjco.2024.11.018

Figure Lengend Snippet: Chemokines expression level in tissue-specific macrophages (log 2 TPM) RNA-Seq datasets were collected from ArrayXpress of European Bioinformatics Institute, which stores data from high-throughput functional genomics experiments ( https://www.ebi.ac.uk/arrayexpress ). These data include information on the expression of T-cell costimulation receptors and coinhibition receptors through experiments submitted directly to ArrayXpress (PMID: 25480296). The red colour indicated log 2 TPM > 0, green colour background indicated log 2 TPM < 0.

Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

Techniques: Expressing, RNA Sequencing, High Throughput Screening Assay, Functional Assay